»Free your Mind Theory«

You know how in the Matrix 1 where Morpheus tell Neo to free his mind when jumping from building to building? Well... would if Neo freed his mind in the real world and was able to use his superhuman powers to stop the sentinals?

Maybe the Matrix is nothing other than an exploitation of the potential of the human mind.

I think that Neo's powers have developed some more, he said that something was different and that he could feel the presence of the sentinels. Now this new gift could have been awakened after his visit to the Architect, It could have been code that was not activated after his encounter with Smith in the corridor, in M1, when it seems obvious to everyone that there was a transference of code from Neo to Smith and vice versa..... When Morpheus told Neo to free his mind he was just trying to get the message across that his mind wasn't bound by the rules anymore and that he could do anything, even jump huge distances....
I hope that helps..

basically...Neo wasnt part of the Matrix system anymore so the rules didnt necessarily apply anymore to him. sorta like when a virus enters a computer...it doesnt follow the rules of the system it has entered. it breaks the rules and does what it is meant to do. im sure you already understand this but i thought i would just put my peice of mind into it.